Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPBD1B2RD01 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPBD1B2RD01 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CENPBD1B2RD01 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.56■□□□□ 0.24
CENPBD1B2RD01 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CENPBD1B2RD01 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CENPBD1B2RD01 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CENPBD1B2RD01 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.56■□□□□ 0.24
CENPBD1B2RD01 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CENPBD1B2RD01 GPAT2P1-201ENST00000444924 1672 ntBASIC16.56■□□□□ 0.24
CENPBD1B2RD01 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CENPBD1B2RD01 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CENPBD1B2RD01 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 KRT8P7-201ENST00000533003 1432 ntBASIC16.55■□□□□ 0.24
CENPBD1B2RD01 AC092338.2-201ENST00000568827 1415 ntBASIC16.55■□□□□ 0.24
CENPBD1B2RD01 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 TSPY14P-201ENST00000303979 915 ntBASIC16.55■□□□□ 0.24
CENPBD1B2RD01 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 BX088651.1-201ENST00000540551 451 ntBASIC16.55■□□□□ 0.24
CENPBD1B2RD01 AL355075.4-201ENST00000554988 638 ntBASIC16.55■□□□□ 0.24
CENPBD1B2RD01 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 AC034236.2-201ENST00000606662 1610 ntBASIC16.55■□□□□ 0.24
CENPBD1B2RD01 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CENPBD1B2RD01 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 AC008556.1-201ENST00000610908 2040 ntBASIC16.54■□□□□ 0.24
CENPBD1B2RD01 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 EGLN1P1-201ENST00000531623 762 ntBASIC16.54■□□□□ 0.24
CENPBD1B2RD01 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 WWOX-216ENST00000569818 525 ntBASIC16.54■□□□□ 0.24
CENPBD1B2RD01 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CENPBD1B2RD01 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.53■□□□□ 0.24
CENPBD1B2RD01 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CENPBD1B2RD01 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.53■□□□□ 0.24
CENPBD1B2RD01 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CENPBD1B2RD01 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CENPBD1B2RD01 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CENPBD1B2RD01 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CENPBD1B2RD01 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CENPBD1B2RD01 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CENPBD1B2RD01 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CENPBD1B2RD01 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CENPBD1B2RD01 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CENPBD1B2RD01 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CENPBD1B2RD01 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CENPBD1B2RD01 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.53■□□□□ 0.24
CENPBD1B2RD01 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms