Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PLEKHD1A6NEE1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC27.78■■■□□ 2.04
PLEKHD1A6NEE1 AC132938.6-201ENST00000623828 1655 ntBASIC27.78■■■□□ 2.04
PLEKHD1A6NEE1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PLEKHD1A6NEE1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
PLEKHD1A6NEE1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PLEKHD1A6NEE1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC27.78■■■□□ 2.04
PLEKHD1A6NEE1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC27.78■■■□□ 2.04
PLEKHD1A6NEE1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
PLEKHD1A6NEE1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
PLEKHD1A6NEE1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PLEKHD1A6NEE1 AC005829.1-201ENST00000570002 483 ntBASIC27.78■■■□□ 2.04
PLEKHD1A6NEE1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
PLEKHD1A6NEE1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PLEKHD1A6NEE1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PLEKHD1A6NEE1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
PLEKHD1A6NEE1 AC010460.3-201ENST00000511359 1579 ntBASIC27.77■■■□□ 2.04
PLEKHD1A6NEE1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
PLEKHD1A6NEE1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
PLEKHD1A6NEE1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC27.77■■■□□ 2.04
PLEKHD1A6NEE1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
PLEKHD1A6NEE1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PLEKHD1A6NEE1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PLEKHD1A6NEE1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PLEKHD1A6NEE1 SPDYE21P-201ENST00000413323 827 ntBASIC27.77■■■□□ 2.04
PLEKHD1A6NEE1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC27.77■■■□□ 2.04
PLEKHD1A6NEE1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC27.77■■■□□ 2.04
PLEKHD1A6NEE1 AL596442.2-201ENST00000610240 980 ntBASIC27.77■■■□□ 2.04
PLEKHD1A6NEE1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PLEKHD1A6NEE1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
PLEKHD1A6NEE1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
PLEKHD1A6NEE1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
PLEKHD1A6NEE1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
PLEKHD1A6NEE1 AFG3L1P-217ENST00000557444 2447 ntBASIC27.76■■■□□ 2.03
PLEKHD1A6NEE1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
PLEKHD1A6NEE1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC27.76■■■□□ 2.03
PLEKHD1A6NEE1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
PLEKHD1A6NEE1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
PLEKHD1A6NEE1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC27.76■■■□□ 2.03
PLEKHD1A6NEE1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC27.76■■■□□ 2.03
PLEKHD1A6NEE1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC27.76■■■□□ 2.03
PLEKHD1A6NEE1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC27.76■■■□□ 2.03
PLEKHD1A6NEE1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
PLEKHD1A6NEE1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC27.76■■■□□ 2.03
PLEKHD1A6NEE1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
PLEKHD1A6NEE1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
PLEKHD1A6NEE1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC27.75■■■□□ 2.03
PLEKHD1A6NEE1 CLDN5-201ENST00000403084 2357 ntBASIC27.74■■■□□ 2.03
PLEKHD1A6NEE1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC27.74■■■□□ 2.03
PLEKHD1A6NEE1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC27.74■■■□□ 2.03
PLEKHD1A6NEE1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC27.74■■■□□ 2.03
PLEKHD1A6NEE1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC27.74■■■□□ 2.03
PLEKHD1A6NEE1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC27.74■■■□□ 2.03
PLEKHD1A6NEE1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PLEKHD1A6NEE1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
PLEKHD1A6NEE1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC27.74■■■□□ 2.03
PLEKHD1A6NEE1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PLEKHD1A6NEE1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC27.74■■■□□ 2.03
PLEKHD1A6NEE1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC27.74■■■□□ 2.03
PLEKHD1A6NEE1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC27.74■■■□□ 2.03
PLEKHD1A6NEE1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PLEKHD1A6NEE1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PLEKHD1A6NEE1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC27.74■■■□□ 2.03
PLEKHD1A6NEE1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PLEKHD1A6NEE1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC27.73■■■□□ 2.03
PLEKHD1A6NEE1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PLEKHD1A6NEE1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
PLEKHD1A6NEE1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PLEKHD1A6NEE1 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PLEKHD1A6NEE1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PLEKHD1A6NEE1 METTL21AP1-201ENST00000438852 635 ntBASIC27.73■■■□□ 2.03
PLEKHD1A6NEE1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC27.73■■■□□ 2.03
PLEKHD1A6NEE1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC27.73■■■□□ 2.03
PLEKHD1A6NEE1 AL589182.2-201ENST00000619332 1049 ntBASIC27.73■■■□□ 2.03
PLEKHD1A6NEE1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC27.73■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms