Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 AL357033.4-201ENST00000617703 1807 ntBASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 KRT18P14-201ENST00000534205 1250 ntBASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV13-2A0A0B4J235 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 KRT18P55-202ENST00000578578 1546 ntBASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 GPX1P1-201ENST00000388829 606 ntBASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 KRT18P11-201ENST00000435214 1283 ntBASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 HES2-206ENST00000489730 730 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAV13-2A0A0B4J235 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV13-2A0A0B4J235 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC11.96□□□□□ -0.49
TRAV13-2A0A0B4J235 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV13-2A0A0B4J235 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC11.96□□□□□ -0.49
TRAV13-2A0A0B4J235 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TRAV13-2A0A0B4J235 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV13-2A0A0B4J235 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms