Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.23■□□□□ 0.19
TRGV5A0A0B4J1U4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.23■□□□□ 0.19
TRGV5A0A0B4J1U4 AC073592.3-201ENST00000625118 1834 ntBASIC16.23■□□□□ 0.19
TRGV5A0A0B4J1U4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV5A0A0B4J1U4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.23■□□□□ 0.19
TRGV5A0A0B4J1U4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV5A0A0B4J1U4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV5A0A0B4J1U4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV5A0A0B4J1U4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV5A0A0B4J1U4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV5A0A0B4J1U4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.23■□□□□ 0.19
TRGV5A0A0B4J1U4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 FDX1P1-201ENST00000449115 551 ntBASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 AL121912.1-201ENST00000603683 238 ntBASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 REXO1L6P-202ENST00000619970 1078 ntBASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 TP73-AS1-210ENST00000637775 1455 ntBASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.22■□□□□ 0.19
TRGV5A0A0B4J1U4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 AKR1C7P-201ENST00000305623 895 ntBASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 AC112698.1-201ENST00000510299 916 ntBASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 AC104692.2-201ENST00000603054 253 ntBASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV5A0A0B4J1U4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRGV5A0A0B4J1U4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 RCN1P2-201ENST00000398357 915 ntBASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 AL138831.2-201ENST00000606564 490 ntBASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.2■□□□□ 0.18
TRGV5A0A0B4J1U4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms