Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 AL096828.2-201ENST00000567259 1965 ntBASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 AC093010.1-201ENST00000473625 1624 ntBASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 KRT18P48-201ENST00000434763 852 ntBASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.5■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 MIR662-201ENST00000384847 95 ntBASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 AC113404.2-201ENST00000507884 177 ntBASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 AL390961.4-201ENST00000623958 2535 ntBASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNFSF12-TNFSF13A0A0A6YY99 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms