Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 ITM2C-210ENST00000620962 501 ntBASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-7A0A0A0MS04 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 HOXB1-202ENST00000577092 1414 ntBASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 FAM201B-201ENST00000458407 597 ntBASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 MIR4674-201ENST00000582457 87 ntBASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-7A0A0A0MS04 KRT8P7-201ENST00000533003 1432 ntBASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 KRT18P29-201ENST00000397031 1267 ntBASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms