Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 ESPNP-201ENST00000270691 2015 ntBASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 FAM87A-204ENST00000613235 858 ntBASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 AP000523.1-201ENST00000398242 1049 ntBASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 AC087499.1-201ENST00000418141 1075 ntBASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 LIN28AP1-201ENST00000429574 405 ntBASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 ATP5G1P1-201ENST00000448724 379 ntBASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 AC024243.1-201ENST00000609234 778 ntBASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRGV1A0A0A0MS02 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV1A0A0A0MS02 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms