Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.76■□□□□ 0.27
HRH3Q9Y5N1 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.76■□□□□ 0.27
HRH3Q9Y5N1 AC011498.5-201ENST00000592027 486 ntBASIC16.76■□□□□ 0.27
HRH3Q9Y5N1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HRH3Q9Y5N1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HRH3Q9Y5N1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HRH3Q9Y5N1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.76■□□□□ 0.27
HRH3Q9Y5N1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.76■□□□□ 0.27
HRH3Q9Y5N1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HRH3Q9Y5N1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.76■□□□□ 0.27
HRH3Q9Y5N1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.76■□□□□ 0.27
HRH3Q9Y5N1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HRH3Q9Y5N1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.76■□□□□ 0.27
HRH3Q9Y5N1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HRH3Q9Y5N1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 AP000997.3-201ENST00000623333 2250 ntBASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 AP000593.1-201ENST00000393668 712 ntBASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HRH3Q9Y5N1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 TPM4P1-201ENST00000436100 807 ntBASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 AP002383.4-201ENST00000442518 975 ntBASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 MIR3180-1-201ENST00000580374 94 ntBASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 MIR3180-3-201ENST00000584616 94 ntBASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 AC009113.1-201ENST00000570267 2443 ntBASIC16.74■□□□□ 0.27
HRH3Q9Y5N1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms