Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 AL353692.3-201ENST00000407031 1396 ntBASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 AC135050.7-201ENST00000624508 2218 ntBASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA9Q9Y5G4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 HLA-A-201ENST00000376802 1334 ntBASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 AKR1C7P-201ENST00000305623 895 ntBASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 POM121L3P-201ENST00000419331 1163 ntBASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCDHGA9Q9Y5G4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHGA9Q9Y5G4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
PCDHGA9Q9Y5G4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
PCDHGA9Q9Y5G4 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.96■□□□□ 0.3
PCDHGA9Q9Y5G4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 AC011840.4-201ENST00000578471 627 ntBASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 AC117500.6-201ENST00000624871 588 ntBASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHGA9Q9Y5G4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 AC106820.2-201ENST00000563775 3264 ntBASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms