Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 ECEL1P2-202ENST00000465689 757 ntBASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 FAM87A-204ENST00000613235 858 ntBASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 AC093677.2-201ENST00000600169 1863 ntBASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 AC134043.2-201ENST00000624206 2238 ntBASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 AC092338.2-201ENST00000568827 1415 ntBASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 BX664615.1-201ENST00000443558 458 ntBASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 AP003041.3-201ENST00000527151 707 ntBASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 AC138028.4-201ENST00000564984 1845 ntBASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGB3Q9Y5G1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 PKD1P1-201ENST00000458669 6805 ntBASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGB3Q9Y5G1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 LINC00896-202ENST00000609602 2128 ntBASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 AC007663.1-201ENST00000438948 1240 ntBASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 AC010203.1-204ENST00000548782 407 ntBASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms