Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 LINC01711-201ENST00000598340 967 ntBASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 AL157888.1-201ENST00000631930 593 ntBASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 AC009102.3-201ENST00000623118 1491 ntBASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHB11Q9Y5F2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 AL845331.1-201ENST00000424978 1190 ntBASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 KRT8P26-201ENST00000534154 1276 ntBASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 AL136038.4-201ENST00000603606 1261 ntBASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 AC016734.2-201ENST00000624325 1377 ntBASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB11Q9Y5F2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB11Q9Y5F2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB11Q9Y5F2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB11Q9Y5F2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PCDHB11Q9Y5F2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB11Q9Y5F2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB11Q9Y5F2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms