Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 CR392000.1-201ENST00000624770 1228 ntBASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 AL163051.1-201ENST00000569214 1512 ntBASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 AD000864.1-201ENST00000624076 2295 ntBASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2D4Q9Y2X8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.39
UBE2D4Q9Y2X8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
UBE2D4Q9Y2X8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
UBE2D4Q9Y2X8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.39
UBE2D4Q9Y2X8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
UBE2D4Q9Y2X8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC12.65□□□□□ -0.39
UBE2D4Q9Y2X8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
UBE2D4Q9Y2X8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
UBE2D4Q9Y2X8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBE2D4Q9Y2X8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms