Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SPG7Q9UQ90 AL139288.1-201ENST00000623748 933 ntBASIC23.64■■□□□ 1.37
SPG7Q9UQ90 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC23.64■■□□□ 1.37
SPG7Q9UQ90 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC23.64■■□□□ 1.37
SPG7Q9UQ90 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC23.64■■□□□ 1.37
SPG7Q9UQ90 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SPG7Q9UQ90 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SPG7Q9UQ90 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
SPG7Q9UQ90 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SPG7Q9UQ90 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
SPG7Q9UQ90 HLA-J-201ENST00000462773 1622 ntBASIC23.63■■□□□ 1.37
SPG7Q9UQ90 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC23.63■■□□□ 1.37
SPG7Q9UQ90 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SPG7Q9UQ90 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC23.63■■□□□ 1.37
SPG7Q9UQ90 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SPG7Q9UQ90 RAB17-203ENST00000409576 466 ntTSL 3 BASIC23.63■■□□□ 1.37
SPG7Q9UQ90 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC23.63■■□□□ 1.37
SPG7Q9UQ90 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC23.63■■□□□ 1.37
SPG7Q9UQ90 OR7E14P-202ENST00000530490 1290 ntBASIC23.63■■□□□ 1.37
SPG7Q9UQ90 CD63-204ENST00000546939 779 ntTSL 3 BASIC23.63■■□□□ 1.37
SPG7Q9UQ90 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC23.63■■□□□ 1.37
SPG7Q9UQ90 CAND2-206ENST00000626378 333 ntTSL 5 BASIC23.63■■□□□ 1.37
SPG7Q9UQ90 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SPG7Q9UQ90 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SPG7Q9UQ90 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SPG7Q9UQ90 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 CD9-202ENST00000382515 1229 ntTSL 5 BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 COX10-202ENST00000429152 875 ntTSL 2 BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 AC025062.2-201ENST00000605477 670 ntBASIC23.62■■□□□ 1.37
SPG7Q9UQ90 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 AC005082.1-201ENST00000413042 2259 ntBASIC23.62■■□□□ 1.37
SPG7Q9UQ90 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SPG7Q9UQ90 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC23.61■■□□□ 1.37
SPG7Q9UQ90 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SPG7Q9UQ90 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC23.61■■□□□ 1.37
SPG7Q9UQ90 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPG7Q9UQ90 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPG7Q9UQ90 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SPG7Q9UQ90 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SPG7Q9UQ90 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPG7Q9UQ90 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SPG7Q9UQ90 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPG7Q9UQ90 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SPG7Q9UQ90 SRP19-202ENST00000445150 833 ntTSL 2 BASIC23.61■■□□□ 1.37
SPG7Q9UQ90 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.61■■□□□ 1.37
SPG7Q9UQ90 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC23.61■■□□□ 1.37
SPG7Q9UQ90 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SPG7Q9UQ90 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPG7Q9UQ90 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SPG7Q9UQ90 ANO7L1-203ENST00000602586 1720 ntBASIC23.61■■□□□ 1.37
SPG7Q9UQ90 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 FAM220CP-201ENST00000395253 831 ntBASIC23.6■■□□□ 1.37
SPG7Q9UQ90 BX842568.4-201ENST00000421222 227 ntBASIC23.6■■□□□ 1.37
SPG7Q9UQ90 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 GMCL1P1-201ENST00000463439 1581 ntBASIC23.6■■□□□ 1.37
SPG7Q9UQ90 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SPG7Q9UQ90 AC097374.2-201ENST00000618617 1306 ntBASIC23.59■■□□□ 1.37
SPG7Q9UQ90 AC104109.2-201ENST00000602919 1418 ntBASIC23.59■■□□□ 1.37
SPG7Q9UQ90 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
SPG7Q9UQ90 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.59■■□□□ 1.37
SPG7Q9UQ90 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPG7Q9UQ90 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPG7Q9UQ90 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC23.59■■□□□ 1.37
SPG7Q9UQ90 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
SPG7Q9UQ90 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC23.59■■□□□ 1.37
SPG7Q9UQ90 AC012640.2-201ENST00000561606 901 ntBASIC23.59■■□□□ 1.37
SPG7Q9UQ90 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPG7Q9UQ90 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC23.59■■□□□ 1.37
SPG7Q9UQ90 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
SPG7Q9UQ90 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPG7Q9UQ90 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms