Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZC3H4Q9UPT8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ZC3H4Q9UPT8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
ZC3H4Q9UPT8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
ZC3H4Q9UPT8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZC3H4Q9UPT8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.88■■□□□ 1.09
ZC3H4Q9UPT8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZC3H4Q9UPT8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 PCDHAC2-203ENST00000615316 3011 ntBASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 CEND1P1-201ENST00000451006 455 ntBASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 PRYP5-201ENST00000451909 266 ntBASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 HLA-J-202ENST00000469281 1241 ntBASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 AC190387.1-201ENST00000551683 408 ntBASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 AL078644.1-201ENST00000609881 752 ntBASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZC3H4Q9UPT8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 CRYGEP-201ENST00000412192 528 ntBASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ZC3H4Q9UPT8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.85■■□□□ 1.09
ZC3H4Q9UPT8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms