Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 IGHV3-22-201ENST00000520721 359 ntBASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2IRD1Q9UHL9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
GTF2IRD1Q9UHL9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
GTF2IRD1Q9UHL9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 AC092865.5-201ENST00000545435 363 ntBASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 AC145285.3-201ENST00000564603 959 ntBASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 AL139288.1-201ENST00000623748 933 ntBASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GTF2IRD1Q9UHL9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 ANO7L1-203ENST00000602586 1720 ntBASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 MIR940-201ENST00000401276 94 ntBASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 AC025062.2-201ENST00000605477 670 ntBASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 AC098818.2-201ENST00000564925 2320 ntBASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.88■□□□□ 0.77
GTF2IRD1Q9UHL9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 AP000974.1-201ENST00000623909 2387 ntBASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 OR7E14P-202ENST00000530490 1290 ntBASIC19.87■□□□□ 0.77
GTF2IRD1Q9UHL9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms