Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 AP000525.1-201ENST00000608286 694 ntBASIC15.97■□□□□ 0.15
DUX4Q9UBX2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 AC006333.2-201ENST00000607957 2099 ntBASIC15.97■□□□□ 0.15
DUX4Q9UBX2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 MIR600HG-201ENST00000449175 5984 ntBASIC15.97■□□□□ 0.15
DUX4Q9UBX2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 FSCN1P1-201ENST00000568912 1481 ntBASIC15.97■□□□□ 0.15
DUX4Q9UBX2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
DUX4Q9UBX2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 KRT8P11-201ENST00000409686 1436 ntBASIC15.96■□□□□ 0.15
DUX4Q9UBX2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 AC130371.2-201ENST00000619443 611 ntBASIC15.96■□□□□ 0.15
DUX4Q9UBX2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DUX4Q9UBX2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
DUX4Q9UBX2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
DUX4Q9UBX2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.96■□□□□ 0.14
DUX4Q9UBX2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
DUX4Q9UBX2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
DUX4Q9UBX2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
DUX4Q9UBX2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.96■□□□□ 0.14
DUX4Q9UBX2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
DUX4Q9UBX2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 AC067852.2-201ENST00000590513 2313 ntBASIC15.95■□□□□ 0.14
DUX4Q9UBX2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 AC141586.3-201ENST00000562166 1838 ntBASIC15.95■□□□□ 0.14
DUX4Q9UBX2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 AL031598.1-201ENST00000561511 1773 ntBASIC15.95■□□□□ 0.14
DUX4Q9UBX2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
DUX4Q9UBX2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DUX4Q9UBX2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
DUX4Q9UBX2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DUX4Q9UBX2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.94■□□□□ 0.14
DUX4Q9UBX2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DUX4Q9UBX2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
DUX4Q9UBX2 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms