Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 AC092597.1-201ENST00000487352 616 ntBASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPARGC1AQ9UBK2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 NOC2LP1-202ENST00000452600 2235 ntBASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 AL031133.1-201ENST00000406807 723 ntBASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 LINC01311-201ENST00000565162 1445 ntBASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPARGC1AQ9UBK2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.89■□□□□ 0.62
PPARGC1AQ9UBK2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PPARGC1AQ9UBK2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
PPARGC1AQ9UBK2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.89■□□□□ 0.62
PPARGC1AQ9UBK2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PPARGC1AQ9UBK2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PPARGC1AQ9UBK2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 AC083849.1-201ENST00000615227 514 ntBASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 NOC2LP2-201ENST00000407594 1944 ntBASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PPARGC1AQ9UBK2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms