Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRIT1Q9P2V4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRIT1Q9P2V4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 TP73-AS1-210ENST00000637775 1455 ntBASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 RCN1P2-201ENST00000398357 915 ntBASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 AC132008.2-207ENST00000454517 770 ntBASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRIT1Q9P2V4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 AC009533.2-201ENST00000543664 586 ntBASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 AC064862.7-201ENST00000604520 867 ntBASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
LRIT1Q9P2V4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.49■□□□□ 0.39
LRIT1Q9P2V4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRIT1Q9P2V4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LRIT1Q9P2V4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRIT1Q9P2V4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRIT1Q9P2V4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRIT1Q9P2V4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
LRIT1Q9P2V4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
LRIT1Q9P2V4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LRIT1Q9P2V4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRIT1Q9P2V4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
LRIT1Q9P2V4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
LRIT1Q9P2V4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.49■□□□□ 0.39
LRIT1Q9P2V4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRIT1Q9P2V4 HLA-A-201ENST00000376802 1334 ntBASIC17.48■□□□□ 0.39
LRIT1Q9P2V4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRIT1Q9P2V4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRIT1Q9P2V4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRIT1Q9P2V4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRIT1Q9P2V4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.48■□□□□ 0.39
LRIT1Q9P2V4 AC004408.2-201ENST00000623613 2777 ntBASIC17.48■□□□□ 0.39
LRIT1Q9P2V4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRIT1Q9P2V4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRIT1Q9P2V4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.48■□□□□ 0.39
LRIT1Q9P2V4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms