Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KCNIP1Q9NZI2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 FLJ13224-201ENST00000313737 1514 ntBASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 KRT17P2-201ENST00000300992 1314 ntBASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 RBM17P1-201ENST00000453646 1190 ntBASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.27■□□□□ 0.04
KCNIP1Q9NZI2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KCNIP1Q9NZI2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.27■□□□□ 0.03
KCNIP1Q9NZI2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KCNIP1Q9NZI2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.27■□□□□ 0.03
KCNIP1Q9NZI2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KCNIP1Q9NZI2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KCNIP1Q9NZI2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.27■□□□□ 0.03
KCNIP1Q9NZI2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.27■□□□□ 0.03
KCNIP1Q9NZI2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KCNIP1Q9NZI2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.27■□□□□ 0.03
KCNIP1Q9NZI2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
KCNIP1Q9NZI2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 AC005332.8-201ENST00000622750 2735 ntBASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 MIR4674-201ENST00000582457 87 ntBASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 AL023803.3-201ENST00000615559 522 ntBASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 AC008764.6-201ENST00000595909 2069 ntBASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
KCNIP1Q9NZI2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 WWOX-216ENST00000569818 525 ntBASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.25■□□□□ 0.03
KCNIP1Q9NZI2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms