Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.05■□□□□ 0.96
RBM28Q9NW13 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RBM28Q9NW13 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 PCED1CP-201ENST00000419887 785 ntBASIC21.05■□□□□ 0.96
RBM28Q9NW13 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.05■□□□□ 0.96
RBM28Q9NW13 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.05■□□□□ 0.96
RBM28Q9NW13 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RBM28Q9NW13 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.05■□□□□ 0.96
RBM28Q9NW13 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.05■□□□□ 0.96
RBM28Q9NW13 AC011498.5-201ENST00000592027 486 ntBASIC21.05■□□□□ 0.96
RBM28Q9NW13 AC116407.4-201ENST00000623319 1061 ntBASIC21.05■□□□□ 0.96
RBM28Q9NW13 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBM28Q9NW13 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.05■□□□□ 0.96
RBM28Q9NW13 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RBM28Q9NW13 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RBM28Q9NW13 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.04■□□□□ 0.96
RBM28Q9NW13 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RBM28Q9NW13 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.04■□□□□ 0.96
RBM28Q9NW13 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RBM28Q9NW13 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RBM28Q9NW13 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RBM28Q9NW13 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.04■□□□□ 0.96
RBM28Q9NW13 KRT18P65-201ENST00000439811 1286 ntBASIC21.04■□□□□ 0.96
RBM28Q9NW13 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.04■□□□□ 0.96
RBM28Q9NW13 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.04■□□□□ 0.96
RBM28Q9NW13 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RBM28Q9NW13 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RBM28Q9NW13 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.04■□□□□ 0.96
RBM28Q9NW13 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RBM28Q9NW13 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RBM28Q9NW13 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.04■□□□□ 0.96
RBM28Q9NW13 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.04■□□□□ 0.96
RBM28Q9NW13 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RBM28Q9NW13 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.04■□□□□ 0.96
RBM28Q9NW13 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RBM28Q9NW13 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RBM28Q9NW13 AC138028.4-201ENST00000564984 1845 ntBASIC21.04■□□□□ 0.96
RBM28Q9NW13 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RBM28Q9NW13 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RBM28Q9NW13 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RBM28Q9NW13 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RBM28Q9NW13 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RBM28Q9NW13 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RBM28Q9NW13 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RBM28Q9NW13 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RBM28Q9NW13 TSPY12P-201ENST00000421279 868 ntBASIC21.03■□□□□ 0.96
RBM28Q9NW13 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RBM28Q9NW13 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RBM28Q9NW13 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RBM28Q9NW13 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RBM28Q9NW13 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RBM28Q9NW13 AC020763.4-201ENST00000623414 4170 ntBASIC21.03■□□□□ 0.96
RBM28Q9NW13 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RBM28Q9NW13 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RBM28Q9NW13 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.03■□□□□ 0.96
RBM28Q9NW13 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.02■□□□□ 0.96
RBM28Q9NW13 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RBM28Q9NW13 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RBM28Q9NW13 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RBM28Q9NW13 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RBM28Q9NW13 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RBM28Q9NW13 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RBM28Q9NW13 IER3-202ENST00000376377 1350 ntBASIC21.02■□□□□ 0.96
RBM28Q9NW13 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RBM28Q9NW13 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RBM28Q9NW13 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RBM28Q9NW13 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RBM28Q9NW13 TSPY22P-201ENST00000427496 604 ntBASIC21.02■□□□□ 0.96
RBM28Q9NW13 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
RBM28Q9NW13 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RBM28Q9NW13 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.02■□□□□ 0.96
RBM28Q9NW13 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RBM28Q9NW13 AC009154.2-201ENST00000621177 724 ntBASIC21.02■□□□□ 0.96
RBM28Q9NW13 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.02■□□□□ 0.96
RBM28Q9NW13 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.02■□□□□ 0.96
RBM28Q9NW13 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.02■□□□□ 0.96
RBM28Q9NW13 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.02■□□□□ 0.96
RBM28Q9NW13 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.02■□□□□ 0.96
RBM28Q9NW13 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms