Protein–RNA interactions for Protein: Q9NVI7

ATAD3A, ATPase family AAA domain-containing protein 3A, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3AQ9NVI7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATAD3AQ9NVI7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.43■□□□□ 0.38
ATAD3AQ9NVI7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.43■□□□□ 0.38
ATAD3AQ9NVI7 AP003041.3-201ENST00000527151 707 ntBASIC17.43■□□□□ 0.38
ATAD3AQ9NVI7 BX088651.1-201ENST00000540551 451 ntBASIC17.43■□□□□ 0.38
ATAD3AQ9NVI7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.43■□□□□ 0.38
ATAD3AQ9NVI7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.43■□□□□ 0.38
ATAD3AQ9NVI7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.43■□□□□ 0.38
ATAD3AQ9NVI7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATAD3AQ9NVI7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.43■□□□□ 0.38
ATAD3AQ9NVI7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATAD3AQ9NVI7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATAD3AQ9NVI7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATAD3AQ9NVI7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATAD3AQ9NVI7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATAD3AQ9NVI7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATAD3AQ9NVI7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATAD3AQ9NVI7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 REXO1L9P-201ENST00000604264 2108 ntBASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 KRT18P23-201ENST00000435622 1283 ntBASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 WWOX-216ENST00000569818 525 ntBASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 AP006294.2-201ENST00000641667 209 ntBASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 AC116562.4-202ENST00000641738 218 ntBASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 FLJ13224-201ENST00000313737 1514 ntBASIC17.42■□□□□ 0.38
ATAD3AQ9NVI7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 AC008764.6-201ENST00000595909 2069 ntBASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 FITM1-202ENST00000559294 800 ntBASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 C2orf69P3-201ENST00000565542 1120 ntBASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATAD3AQ9NVI7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATAD3AQ9NVI7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATAD3AQ9NVI7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATAD3AQ9NVI7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.4■□□□□ 0.38
ATAD3AQ9NVI7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.4■□□□□ 0.38
ATAD3AQ9NVI7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATAD3AQ9NVI7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATAD3AQ9NVI7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATAD3AQ9NVI7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms