Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 KRT18P38-201ENST00000449496 1282 ntBASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 AL359075.1-203ENST00000462729 1002 ntBASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 NTF6B-201ENST00000591913 560 ntBASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NECTIN3Q9NQS3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 KRT8P7-201ENST00000533003 1432 ntBASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 AL499627.1-201ENST00000569373 2188 ntBASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 FAM8A6P-201ENST00000407496 1135 ntBASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 AC092647.4-201ENST00000457211 535 ntBASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 AC104390.1-201ENST00000555663 520 ntBASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 AL590326.2-201ENST00000625139 305 ntBASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NECTIN3Q9NQS3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 SPDYE15P-201ENST00000424157 909 ntBASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 HOMER2P1-201ENST00000455653 964 ntBASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 ANO7L1-203ENST00000602586 1720 ntBASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
NECTIN3Q9NQS3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms