Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 RCC2P6-201ENST00000526625 1557 ntBASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
C12orf4Q9NQ89 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 MYC-208ENST00000641036 567 ntBASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C12orf4Q9NQ89 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.8■□□□□ 0.12
C12orf4Q9NQ89 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms