Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.6■□□□□ 0.57
SP110Q9HB58 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.6■□□□□ 0.57
SP110Q9HB58 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.6■□□□□ 0.57
SP110Q9HB58 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.6■□□□□ 0.57
SP110Q9HB58 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.6■□□□□ 0.57
SP110Q9HB58 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SP110Q9HB58 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
SP110Q9HB58 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.6■□□□□ 0.57
SP110Q9HB58 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.6■□□□□ 0.57
SP110Q9HB58 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SP110Q9HB58 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SP110Q9HB58 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SP110Q9HB58 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.59■□□□□ 0.57
SP110Q9HB58 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
SP110Q9HB58 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SP110Q9HB58 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.59■□□□□ 0.57
SP110Q9HB58 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SP110Q9HB58 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SP110Q9HB58 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SP110Q9HB58 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SP110Q9HB58 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.59■□□□□ 0.57
SP110Q9HB58 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.59■□□□□ 0.57
SP110Q9HB58 AL031133.1-201ENST00000406807 723 ntBASIC18.59■□□□□ 0.57
SP110Q9HB58 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.59■□□□□ 0.57
SP110Q9HB58 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.59■□□□□ 0.57
SP110Q9HB58 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SP110Q9HB58 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.59■□□□□ 0.57
SP110Q9HB58 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.59■□□□□ 0.57
SP110Q9HB58 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SP110Q9HB58 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
SP110Q9HB58 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SP110Q9HB58 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
SP110Q9HB58 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SP110Q9HB58 KRT89P-201ENST00000620027 1478 ntBASIC18.58■□□□□ 0.57
SP110Q9HB58 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SP110Q9HB58 AC135050.7-201ENST00000624508 2218 ntBASIC18.58■□□□□ 0.57
SP110Q9HB58 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SP110Q9HB58 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SP110Q9HB58 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SP110Q9HB58 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SP110Q9HB58 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SP110Q9HB58 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SP110Q9HB58 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SP110Q9HB58 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.58■□□□□ 0.56
SP110Q9HB58 MIR662-201ENST00000384847 95 ntBASIC18.58■□□□□ 0.56
SP110Q9HB58 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SP110Q9HB58 AP003733.1-201ENST00000491725 852 ntBASIC18.58■□□□□ 0.56
SP110Q9HB58 KRT18P35-201ENST00000510488 1269 ntBASIC18.58■□□□□ 0.56
SP110Q9HB58 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.58■□□□□ 0.56
SP110Q9HB58 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.58■□□□□ 0.56
SP110Q9HB58 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.58■□□□□ 0.56
SP110Q9HB58 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.58■□□□□ 0.56
SP110Q9HB58 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SP110Q9HB58 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.58■□□□□ 0.56
SP110Q9HB58 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SP110Q9HB58 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SP110Q9HB58 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SP110Q9HB58 AL096828.2-201ENST00000567259 1965 ntBASIC18.58■□□□□ 0.56
SP110Q9HB58 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SP110Q9HB58 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SP110Q9HB58 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SP110Q9HB58 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SP110Q9HB58 ABALON-201ENST00000629058 1903 ntBASIC18.58■□□□□ 0.56
SP110Q9HB58 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.58■□□□□ 0.56
SP110Q9HB58 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SP110Q9HB58 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SP110Q9HB58 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
SP110Q9HB58 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.58■□□□□ 0.56
SP110Q9HB58 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.58■□□□□ 0.56
SP110Q9HB58 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SP110Q9HB58 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SP110Q9HB58 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SP110Q9HB58 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.57■□□□□ 0.56
SP110Q9HB58 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.57■□□□□ 0.56
SP110Q9HB58 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SP110Q9HB58 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.57■□□□□ 0.56
SP110Q9HB58 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SP110Q9HB58 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SP110Q9HB58 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SP110Q9HB58 AL645929.1-201ENST00000420084 975 ntBASIC18.57■□□□□ 0.56
SP110Q9HB58 SPDYE13P-201ENST00000445314 798 ntBASIC18.57■□□□□ 0.56
SP110Q9HB58 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.57■□□□□ 0.56
SP110Q9HB58 AL121956.5-201ENST00000625261 221 ntBASIC18.57■□□□□ 0.56
SP110Q9HB58 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
SP110Q9HB58 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SP110Q9HB58 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.57■□□□□ 0.56
SP110Q9HB58 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SP110Q9HB58 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SP110Q9HB58 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SP110Q9HB58 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SP110Q9HB58 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SP110Q9HB58 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.56■□□□□ 0.56
SP110Q9HB58 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.56■□□□□ 0.56
SP110Q9HB58 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms