Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 DOC2GP-204ENST00000639052 2548 ntBASIC17.31■□□□□ 0.36
VCX3BQ9H321 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VCX3BQ9H321 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VCX3BQ9H321 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
VCX3BQ9H321 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.31■□□□□ 0.36
VCX3BQ9H321 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.31■□□□□ 0.36
VCX3BQ9H321 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.31■□□□□ 0.36
VCX3BQ9H321 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 KRT19P1-201ENST00000405746 1186 ntBASIC17.31■□□□□ 0.36
VCX3BQ9H321 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 TSPY23P-201ENST00000440136 739 ntBASIC17.31■□□□□ 0.36
VCX3BQ9H321 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.31■□□□□ 0.36
VCX3BQ9H321 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
VCX3BQ9H321 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.31■□□□□ 0.36
VCX3BQ9H321 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VCX3BQ9H321 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.31■□□□□ 0.36
VCX3BQ9H321 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCX3BQ9H321 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCX3BQ9H321 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCX3BQ9H321 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
VCX3BQ9H321 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.3■□□□□ 0.36
VCX3BQ9H321 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCX3BQ9H321 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCX3BQ9H321 PCDHA1-201ENST00000378133 2726 ntBASIC17.3■□□□□ 0.36
VCX3BQ9H321 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCX3BQ9H321 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
VCX3BQ9H321 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCX3BQ9H321 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
VCX3BQ9H321 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCX3BQ9H321 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VCX3BQ9H321 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
VCX3BQ9H321 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
VCX3BQ9H321 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
VCX3BQ9H321 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.3■□□□□ 0.36
VCX3BQ9H321 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.3■□□□□ 0.36
VCX3BQ9H321 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.3■□□□□ 0.36
VCX3BQ9H321 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.3■□□□□ 0.36
VCX3BQ9H321 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.3■□□□□ 0.36
VCX3BQ9H321 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCX3BQ9H321 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VCX3BQ9H321 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCX3BQ9H321 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.3■□□□□ 0.36
VCX3BQ9H321 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VCX3BQ9H321 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
VCX3BQ9H321 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.29■□□□□ 0.36
VCX3BQ9H321 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VCX3BQ9H321 MYLKP1-201ENST00000509077 1580 ntBASIC17.29■□□□□ 0.36
VCX3BQ9H321 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VCX3BQ9H321 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.29■□□□□ 0.36
VCX3BQ9H321 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
VCX3BQ9H321 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.29■□□□□ 0.36
VCX3BQ9H321 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.29■□□□□ 0.36
VCX3BQ9H321 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.29■□□□□ 0.36
VCX3BQ9H321 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 PBX2P1-201ENST00000493219 1291 ntBASIC17.29■□□□□ 0.36
VCX3BQ9H321 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.29■□□□□ 0.36
VCX3BQ9H321 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.29■□□□□ 0.36
VCX3BQ9H321 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 AC004854.2-201ENST00000608450 1441 ntBASIC17.29■□□□□ 0.36
VCX3BQ9H321 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VCX3BQ9H321 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms