Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NBPF3Q9H094 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NBPF3Q9H094 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.5■■□□□ 1.03
NBPF3Q9H094 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.5■■□□□ 1.03
NBPF3Q9H094 AL353692.3-201ENST00000407031 1396 ntBASIC21.5■■□□□ 1.03
NBPF3Q9H094 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NBPF3Q9H094 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NBPF3Q9H094 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.5■■□□□ 1.03
NBPF3Q9H094 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NBPF3Q9H094 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NBPF3Q9H094 AP002383.4-201ENST00000442518 975 ntBASIC21.5■■□□□ 1.03
NBPF3Q9H094 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.5■■□□□ 1.03
NBPF3Q9H094 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.5■■□□□ 1.03
NBPF3Q9H094 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NBPF3Q9H094 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.5■■□□□ 1.03
NBPF3Q9H094 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NBPF3Q9H094 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.5■■□□□ 1.03
NBPF3Q9H094 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NBPF3Q9H094 REXO1L9P-201ENST00000604264 2108 ntBASIC21.5■■□□□ 1.03
NBPF3Q9H094 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
NBPF3Q9H094 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.5■■□□□ 1.03
NBPF3Q9H094 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NBPF3Q9H094 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF3Q9H094 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
NBPF3Q9H094 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
NBPF3Q9H094 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF3Q9H094 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF3Q9H094 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF3Q9H094 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.49■■□□□ 1.03
NBPF3Q9H094 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.49■■□□□ 1.03
NBPF3Q9H094 AC009078.2-202ENST00000463353 338 ntBASIC21.49■■□□□ 1.03
NBPF3Q9H094 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.49■■□□□ 1.03
NBPF3Q9H094 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.49■■□□□ 1.03
NBPF3Q9H094 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF3Q9H094 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.49■■□□□ 1.03
NBPF3Q9H094 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF3Q9H094 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
NBPF3Q9H094 AL121672.3-201ENST00000608644 468 ntBASIC21.49■■□□□ 1.03
NBPF3Q9H094 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF3Q9H094 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.49■■□□□ 1.03
NBPF3Q9H094 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
NBPF3Q9H094 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF3Q9H094 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF3Q9H094 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF3Q9H094 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF3Q9H094 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.49■■□□□ 1.03
NBPF3Q9H094 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.49■■□□□ 1.03
NBPF3Q9H094 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF3Q9H094 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF3Q9H094 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF3Q9H094 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF3Q9H094 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF3Q9H094 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF3Q9H094 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF3Q9H094 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF3Q9H094 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.48■■□□□ 1.03
NBPF3Q9H094 NUS1P1-201ENST00000446295 882 ntBASIC21.48■■□□□ 1.03
NBPF3Q9H094 BX276092.5-203ENST00000456199 560 ntBASIC21.48■■□□□ 1.03
NBPF3Q9H094 KRT8P26-201ENST00000534154 1276 ntBASIC21.48■■□□□ 1.03
NBPF3Q9H094 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.48■■□□□ 1.03
NBPF3Q9H094 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.48■■□□□ 1.03
NBPF3Q9H094 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.48■■□□□ 1.03
NBPF3Q9H094 MIR3180-1-201ENST00000580374 94 ntBASIC21.48■■□□□ 1.03
NBPF3Q9H094 MIR3180-3-201ENST00000584616 94 ntBASIC21.48■■□□□ 1.03
NBPF3Q9H094 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
NBPF3Q9H094 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.48■■□□□ 1.03
NBPF3Q9H094 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF3Q9H094 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NBPF3Q9H094 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.48■■□□□ 1.03
NBPF3Q9H094 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF3Q9H094 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF3Q9H094 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.48■■□□□ 1.03
NBPF3Q9H094 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.48■■□□□ 1.03
NBPF3Q9H094 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF3Q9H094 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
NBPF3Q9H094 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
NBPF3Q9H094 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF3Q9H094 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF3Q9H094 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NBPF3Q9H094 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF3Q9H094 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF3Q9H094 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.47■■□□□ 1.03
NBPF3Q9H094 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.47■■□□□ 1.03
NBPF3Q9H094 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.47■■□□□ 1.03
NBPF3Q9H094 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
NBPF3Q9H094 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.47■■□□□ 1.03
NBPF3Q9H094 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
NBPF3Q9H094 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
NBPF3Q9H094 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.47■■□□□ 1.03
NBPF3Q9H094 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.47■■□□□ 1.03
NBPF3Q9H094 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF3Q9H094 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms