Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM2Q9C040 AC068880.1-201ENST00000507289 2297 ntBASIC16.73■□□□□ 0.27
TRIM2Q9C040 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM2Q9C040 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRIM2Q9C040 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRIM2Q9C040 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM2Q9C040 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRIM2Q9C040 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM2Q9C040 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM2Q9C040 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM2Q9C040 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM2Q9C040 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM2Q9C040 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM2Q9C040 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM2Q9C040 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM2Q9C040 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM2Q9C040 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM2Q9C040 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 SLC25A3P1-201ENST00000443844 931 ntBASIC16.72■□□□□ 0.27
TRIM2Q9C040 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM2Q9C040 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM2Q9C040 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM2Q9C040 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM2Q9C040 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM2Q9C040 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM2Q9C040 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM2Q9C040 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM2Q9C040 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM2Q9C040 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM2Q9C040 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM2Q9C040 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM2Q9C040 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 INGX-201ENST00000359239 846 ntBASIC16.71■□□□□ 0.27
TRIM2Q9C040 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM2Q9C040 HMGA1P5-201ENST00000412453 271 ntBASIC16.71■□□□□ 0.27
TRIM2Q9C040 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM2Q9C040 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.71■□□□□ 0.27
TRIM2Q9C040 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM2Q9C040 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.71■□□□□ 0.27
TRIM2Q9C040 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM2Q9C040 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM2Q9C040 AC010240.3-201ENST00000607688 395 ntBASIC16.71■□□□□ 0.27
TRIM2Q9C040 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TRIM2Q9C040 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM2Q9C040 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRIM2Q9C040 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM2Q9C040 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms