Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 RCN1P2-201ENST00000398357 915 ntBASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 NUS1P1-201ENST00000446295 882 ntBASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 AC096582.2-201ENST00000510860 516 ntBASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 MOK-208ENST00000519058 917 ntTSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 AC111152.3-201ENST00000569699 673 ntBASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 AC090616.6-201ENST00000582640 721 ntBASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 AL049840.3-201ENST00000602669 611 ntBASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 AC018445.3-201ENST00000624177 1945 ntBASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 AC007613.1-201ENST00000572811 2597 ntBASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 AC135776.1-201ENST00000319817 2481 ntBASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 NEFHP1-201ENST00000412845 2629 ntBASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-3Q9BYR4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms