Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 NEK4P2-201ENST00000580004 1012 ntBASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 AC079602.3-201ENST00000623931 403 ntBASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RSPO3Q9BXY4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 PVRIG2P-201ENST00000435460 978 ntBASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 GCSHP2-201ENST00000560971 527 ntBASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO3Q9BXY4 LINC01568-207ENST00000641790 1380 ntBASIC16.64■□□□□ 0.26
RSPO3Q9BXY4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.64■□□□□ 0.25
RSPO3Q9BXY4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms