Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.53■□□□□ 0.24
NPAS1Q99742 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NPAS1Q99742 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NPAS1Q99742 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.53■□□□□ 0.24
NPAS1Q99742 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.53■□□□□ 0.24
NPAS1Q99742 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.53■□□□□ 0.24
NPAS1Q99742 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
NPAS1Q99742 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.53■□□□□ 0.24
NPAS1Q99742 AC009065.1-201ENST00000564055 1225 ntBASIC16.53■□□□□ 0.24
NPAS1Q99742 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.53■□□□□ 0.24
NPAS1Q99742 RNF126P1-202ENST00000569893 925 ntBASIC16.53■□□□□ 0.24
NPAS1Q99742 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
NPAS1Q99742 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.53■□□□□ 0.24
NPAS1Q99742 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPAS1Q99742 AC135050.7-201ENST00000624508 2218 ntBASIC16.53■□□□□ 0.24
NPAS1Q99742 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.53■□□□□ 0.24
NPAS1Q99742 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS1Q99742 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.52■□□□□ 0.24
NPAS1Q99742 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS1Q99742 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
NPAS1Q99742 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.52■□□□□ 0.24
NPAS1Q99742 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS1Q99742 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.52■□□□□ 0.24
NPAS1Q99742 AC005332.1-201ENST00000577698 1310 ntBASIC16.52■□□□□ 0.24
NPAS1Q99742 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS1Q99742 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS1Q99742 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS1Q99742 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.52■□□□□ 0.24
NPAS1Q99742 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPAS1Q99742 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.52■□□□□ 0.24
NPAS1Q99742 MIR662-201ENST00000384847 95 ntBASIC16.52■□□□□ 0.24
NPAS1Q99742 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.52■□□□□ 0.24
NPAS1Q99742 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.52■□□□□ 0.24
NPAS1Q99742 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.52■□□□□ 0.24
NPAS1Q99742 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.52■□□□□ 0.24
NPAS1Q99742 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.52■□□□□ 0.24
NPAS1Q99742 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.52■□□□□ 0.24
NPAS1Q99742 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.52■□□□□ 0.24
NPAS1Q99742 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.52■□□□□ 0.24
NPAS1Q99742 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.52■□□□□ 0.24
NPAS1Q99742 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.52■□□□□ 0.24
NPAS1Q99742 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.52■□□□□ 0.24
NPAS1Q99742 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
NPAS1Q99742 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
NPAS1Q99742 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS1Q99742 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS1Q99742 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS1Q99742 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
NPAS1Q99742 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS1Q99742 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS1Q99742 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS1Q99742 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
NPAS1Q99742 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
NPAS1Q99742 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.52■□□□□ 0.23
NPAS1Q99742 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS1Q99742 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS1Q99742 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NPAS1Q99742 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS1Q99742 AL162741.1-201ENST00000565563 1558 ntBASIC16.51■□□□□ 0.23
NPAS1Q99742 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS1Q99742 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS1Q99742 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.51■□□□□ 0.23
NPAS1Q99742 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS1Q99742 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS1Q99742 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS1Q99742 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NPAS1Q99742 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS1Q99742 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS1Q99742 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.51■□□□□ 0.23
NPAS1Q99742 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.51■□□□□ 0.23
NPAS1Q99742 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.51■□□□□ 0.23
NPAS1Q99742 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
NPAS1Q99742 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.51■□□□□ 0.23
NPAS1Q99742 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS1Q99742 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.51■□□□□ 0.23
NPAS1Q99742 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NPAS1Q99742 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.51■□□□□ 0.23
NPAS1Q99742 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NPAS1Q99742 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms