Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PHOX2BQ99453 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PHOX2BQ99453 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.33■□□□□ 0.53
PHOX2BQ99453 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHOX2BQ99453 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.33■□□□□ 0.52
PHOX2BQ99453 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.33■□□□□ 0.52
PHOX2BQ99453 KRT18P2-201ENST00000447938 1258 ntBASIC18.33■□□□□ 0.52
PHOX2BQ99453 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.33■□□□□ 0.52
PHOX2BQ99453 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PHOX2BQ99453 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PHOX2BQ99453 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.33■□□□□ 0.52
PHOX2BQ99453 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.33■□□□□ 0.52
PHOX2BQ99453 AC025062.2-201ENST00000605477 670 ntBASIC18.33■□□□□ 0.52
PHOX2BQ99453 AC064836.3-201ENST00000607928 673 ntBASIC18.33■□□□□ 0.52
PHOX2BQ99453 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHOX2BQ99453 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHOX2BQ99453 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHOX2BQ99453 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHOX2BQ99453 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PHOX2BQ99453 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHOX2BQ99453 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHOX2BQ99453 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.33■□□□□ 0.52
PHOX2BQ99453 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHOX2BQ99453 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHOX2BQ99453 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.32■□□□□ 0.52
PHOX2BQ99453 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHOX2BQ99453 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHOX2BQ99453 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHOX2BQ99453 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.32■□□□□ 0.52
PHOX2BQ99453 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHOX2BQ99453 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.32■□□□□ 0.52
PHOX2BQ99453 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHOX2BQ99453 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.32■□□□□ 0.52
PHOX2BQ99453 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.32■□□□□ 0.52
PHOX2BQ99453 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.32■□□□□ 0.52
PHOX2BQ99453 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHOX2BQ99453 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHOX2BQ99453 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.32■□□□□ 0.52
PHOX2BQ99453 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.32■□□□□ 0.52
PHOX2BQ99453 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.32■□□□□ 0.52
PHOX2BQ99453 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.32■□□□□ 0.52
PHOX2BQ99453 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.32■□□□□ 0.52
PHOX2BQ99453 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.32■□□□□ 0.52
PHOX2BQ99453 AC024563.2-201ENST00000603282 481 ntBASIC18.32■□□□□ 0.52
PHOX2BQ99453 AL158211.5-201ENST00000623583 2518 ntBASIC18.32■□□□□ 0.52
PHOX2BQ99453 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHOX2BQ99453 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.32■□□□□ 0.52
PHOX2BQ99453 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHOX2BQ99453 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PHOX2BQ99453 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHOX2BQ99453 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHOX2BQ99453 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.32■□□□□ 0.52
PHOX2BQ99453 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHOX2BQ99453 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHOX2BQ99453 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHOX2BQ99453 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHOX2BQ99453 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHOX2BQ99453 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.31■□□□□ 0.52
PHOX2BQ99453 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
PHOX2BQ99453 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHOX2BQ99453 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PHOX2BQ99453 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHOX2BQ99453 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PHOX2BQ99453 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PHOX2BQ99453 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
PHOX2BQ99453 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.31■□□□□ 0.52
PHOX2BQ99453 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHOX2BQ99453 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHOX2BQ99453 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PHOX2BQ99453 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.31■□□□□ 0.52
PHOX2BQ99453 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.31■□□□□ 0.52
PHOX2BQ99453 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.31■□□□□ 0.52
PHOX2BQ99453 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.31■□□□□ 0.52
PHOX2BQ99453 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.31■□□□□ 0.52
PHOX2BQ99453 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.31■□□□□ 0.52
PHOX2BQ99453 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.31■□□□□ 0.52
PHOX2BQ99453 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHOX2BQ99453 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PHOX2BQ99453 RN7SL832P-201ENST00000607781 1756 ntBASIC18.31■□□□□ 0.52
PHOX2BQ99453 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PHOX2BQ99453 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PHOX2BQ99453 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PHOX2BQ99453 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
PHOX2BQ99453 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.31■□□□□ 0.52
PHOX2BQ99453 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PHOX2BQ99453 TP73-AS1-210ENST00000637775 1455 ntBASIC18.31■□□□□ 0.52
PHOX2BQ99453 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHOX2BQ99453 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHOX2BQ99453 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.31■□□□□ 0.52
PHOX2BQ99453 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHOX2BQ99453 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHOX2BQ99453 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHOX2BQ99453 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHOX2BQ99453 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHOX2BQ99453 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PHOX2BQ99453 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PHOX2BQ99453 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHOX2BQ99453 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHOX2BQ99453 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.3■□□□□ 0.52
PHOX2BQ99453 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms