Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.32■□□□□ 0.04
CLCC1Q96S66 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCC1Q96S66 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCC1Q96S66 AL391005.1-201ENST00000623953 2435 ntBASIC15.32■□□□□ 0.04
CLCC1Q96S66 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CLCC1Q96S66 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLCC1Q96S66 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLCC1Q96S66 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CLCC1Q96S66 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCC1Q96S66 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CLCC1Q96S66 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 RPS2P4-201ENST00000476944 856 ntBASIC15.31■□□□□ 0.04
CLCC1Q96S66 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.31■□□□□ 0.04
CLCC1Q96S66 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.31■□□□□ 0.04
CLCC1Q96S66 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
CLCC1Q96S66 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLCC1Q96S66 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCC1Q96S66 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CLCC1Q96S66 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCC1Q96S66 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCC1Q96S66 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCC1Q96S66 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCC1Q96S66 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCC1Q96S66 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCC1Q96S66 AC126755.1-201ENST00000525846 6405 ntBASIC15.3■□□□□ 0.04
CLCC1Q96S66 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCC1Q96S66 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCC1Q96S66 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCC1Q96S66 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCC1Q96S66 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCC1Q96S66 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCC1Q96S66 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCC1Q96S66 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCC1Q96S66 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCC1Q96S66 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCC1Q96S66 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.3■□□□□ 0.04
CLCC1Q96S66 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.3■□□□□ 0.04
CLCC1Q96S66 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCC1Q96S66 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCC1Q96S66 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCC1Q96S66 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCC1Q96S66 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CLCC1Q96S66 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCC1Q96S66 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCC1Q96S66 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCC1Q96S66 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCC1Q96S66 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCC1Q96S66 ANO7L1-203ENST00000602586 1720 ntBASIC15.3■□□□□ 0.04
CLCC1Q96S66 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCC1Q96S66 CR392000.1-201ENST00000624770 1228 ntBASIC15.3■□□□□ 0.04
CLCC1Q96S66 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCC1Q96S66 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLCC1Q96S66 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLCC1Q96S66 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CLCC1Q96S66 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCC1Q96S66 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCC1Q96S66 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CLCC1Q96S66 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLCC1Q96S66 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLCC1Q96S66 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CLCC1Q96S66 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CLCC1Q96S66 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCC1Q96S66 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCC1Q96S66 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCC1Q96S66 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCC1Q96S66 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCC1Q96S66 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCC1Q96S66 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLCC1Q96S66 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCC1Q96S66 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCC1Q96S66 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms