Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NUDCD1Q96RS6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 SEC1P-202ENST00000473944 940 ntBASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 YBX1P2-201ENST00000489612 999 ntBASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 AC104390.1-201ENST00000555663 520 ntBASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 AC024243.1-201ENST00000609234 778 ntBASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 AL499627.1-201ENST00000569373 2188 ntBASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NUDCD1Q96RS6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 AC104076.2-201ENST00000448912 469 ntBASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 AC011558.1-201ENST00000623459 338 ntBASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NUDCD1Q96RS6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 GCSHP2-201ENST00000560971 527 ntBASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 AL441883.1-201ENST00000566170 1045 ntBASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 PKD1P1-201ENST00000458669 6805 ntBASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.77■□□□□ 0.6
NUDCD1Q96RS6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NUDCD1Q96RS6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NUDCD1Q96RS6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
NUDCD1Q96RS6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NUDCD1Q96RS6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 MYLKP1-201ENST00000509077 1580 ntBASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.76■□□□□ 0.59
NUDCD1Q96RS6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms