Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.5■■□□□ 1.03
NEK1Q96PY6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.5■■□□□ 1.03
NEK1Q96PY6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.5■■□□□ 1.03
NEK1Q96PY6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.5■■□□□ 1.03
NEK1Q96PY6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.5■■□□□ 1.03
NEK1Q96PY6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
NEK1Q96PY6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NEK1Q96PY6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NEK1Q96PY6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NEK1Q96PY6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NEK1Q96PY6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NEK1Q96PY6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.49■■□□□ 1.03
NEK1Q96PY6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NEK1Q96PY6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.49■■□□□ 1.03
NEK1Q96PY6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.49■■□□□ 1.03
NEK1Q96PY6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.49■■□□□ 1.03
NEK1Q96PY6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NEK1Q96PY6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NEK1Q96PY6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NEK1Q96PY6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NEK1Q96PY6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
NEK1Q96PY6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NEK1Q96PY6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NEK1Q96PY6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.49■■□□□ 1.03
NEK1Q96PY6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.49■■□□□ 1.03
NEK1Q96PY6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.49■■□□□ 1.03
NEK1Q96PY6 TMPOP1-202ENST00000424642 1267 ntBASIC21.49■■□□□ 1.03
NEK1Q96PY6 HLA-F-220ENST00000434407 884 ntBASIC21.49■■□□□ 1.03
NEK1Q96PY6 HOMER2P1-201ENST00000455653 964 ntBASIC21.49■■□□□ 1.03
NEK1Q96PY6 AC092597.1-201ENST00000487352 616 ntBASIC21.49■■□□□ 1.03
NEK1Q96PY6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NEK1Q96PY6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.49■■□□□ 1.03
NEK1Q96PY6 AC024563.2-201ENST00000603282 481 ntBASIC21.49■■□□□ 1.03
NEK1Q96PY6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.49■■□□□ 1.03
NEK1Q96PY6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NEK1Q96PY6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
NEK1Q96PY6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
NEK1Q96PY6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
NEK1Q96PY6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NEK1Q96PY6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NEK1Q96PY6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
NEK1Q96PY6 AC067852.2-201ENST00000590513 2313 ntBASIC21.49■■□□□ 1.03
NEK1Q96PY6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.49■■□□□ 1.03
NEK1Q96PY6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NEK1Q96PY6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NEK1Q96PY6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
NEK1Q96PY6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NEK1Q96PY6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.48■■□□□ 1.03
NEK1Q96PY6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NEK1Q96PY6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NEK1Q96PY6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
NEK1Q96PY6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NEK1Q96PY6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.48■■□□□ 1.03
NEK1Q96PY6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.48■■□□□ 1.03
NEK1Q96PY6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.48■■□□□ 1.03
NEK1Q96PY6 RN7SL850P-201ENST00000579959 291 ntBASIC21.48■■□□□ 1.03
NEK1Q96PY6 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.48■■□□□ 1.03
NEK1Q96PY6 AL445228.2-201ENST00000605589 952 ntBASIC21.48■■□□□ 1.03
NEK1Q96PY6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NEK1Q96PY6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
NEK1Q96PY6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NEK1Q96PY6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NEK1Q96PY6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NEK1Q96PY6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.47■■□□□ 1.03
NEK1Q96PY6 LINC00167-201ENST00000530583 1419 ntBASIC21.47■■□□□ 1.03
NEK1Q96PY6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.47■■□□□ 1.03
NEK1Q96PY6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
NEK1Q96PY6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
NEK1Q96PY6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NEK1Q96PY6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NEK1Q96PY6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NEK1Q96PY6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
NEK1Q96PY6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NEK1Q96PY6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NEK1Q96PY6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NEK1Q96PY6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
NEK1Q96PY6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NEK1Q96PY6 DUTP2-201ENST00000519164 463 ntBASIC21.47■■□□□ 1.03
NEK1Q96PY6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NEK1Q96PY6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
NEK1Q96PY6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NEK1Q96PY6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NEK1Q96PY6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NEK1Q96PY6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
NEK1Q96PY6 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.47■■□□□ 1.03
NEK1Q96PY6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NEK1Q96PY6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEK1Q96PY6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEK1Q96PY6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NEK1Q96PY6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEK1Q96PY6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NEK1Q96PY6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.46■■□□□ 1.03
NEK1Q96PY6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
NEK1Q96PY6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEK1Q96PY6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEK1Q96PY6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEK1Q96PY6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEK1Q96PY6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEK1Q96PY6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NEK1Q96PY6 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms