Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.49■□□□□ 0.55
LRRC3BQ96PB8 ZNF259P1-201ENST00000407656 1365 ntBASIC18.49■□□□□ 0.55
LRRC3BQ96PB8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC3BQ96PB8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC3BQ96PB8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC3BQ96PB8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC3BQ96PB8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC3BQ96PB8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC3BQ96PB8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC3BQ96PB8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LRRC3BQ96PB8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC3BQ96PB8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC3BQ96PB8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC3BQ96PB8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC3BQ96PB8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.48■□□□□ 0.55
LRRC3BQ96PB8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC3BQ96PB8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC3BQ96PB8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC3BQ96PB8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.48■□□□□ 0.55
LRRC3BQ96PB8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.48■□□□□ 0.55
LRRC3BQ96PB8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.48■□□□□ 0.55
LRRC3BQ96PB8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LRRC3BQ96PB8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.48■□□□□ 0.55
LRRC3BQ96PB8 AC092865.5-201ENST00000545435 363 ntBASIC18.48■□□□□ 0.55
LRRC3BQ96PB8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC3BQ96PB8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC3BQ96PB8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.48■□□□□ 0.55
LRRC3BQ96PB8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
LRRC3BQ96PB8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LRRC3BQ96PB8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 AC098831.1-202ENST00000438821 336 ntBASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 AC092910.1-201ENST00000482027 1129 ntBASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 OR7E14P-202ENST00000530490 1290 ntBASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 AC034105.1-201ENST00000563488 319 ntBASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 AC097374.2-201ENST00000618617 1306 ntBASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3BQ96PB8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 SLC25A24-204ENST00000569674 2357 ntBASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 MTDHP4-201ENST00000600287 670 ntBASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 AC010460.3-201ENST00000511359 1579 ntBASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3BQ96PB8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LRRC3BQ96PB8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.46■□□□□ 0.54
LRRC3BQ96PB8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.46■□□□□ 0.54
LRRC3BQ96PB8 HLA-J-201ENST00000462773 1622 ntBASIC18.45■□□□□ 0.54
LRRC3BQ96PB8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC3BQ96PB8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC3BQ96PB8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms