Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLNQ969V3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLNQ969V3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLNQ969V3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLNQ969V3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLNQ969V3 NFIC-211ENST00000641145 8399 ntBASIC17.64■□□□□ 0.41
NCLNQ969V3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.64■□□□□ 0.41
NCLNQ969V3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLNQ969V3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLNQ969V3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.64■□□□□ 0.41
NCLNQ969V3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NCLNQ969V3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NCLNQ969V3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.63■□□□□ 0.41
NCLNQ969V3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 AC005521.1-201ENST00000393351 872 ntBASIC17.63■□□□□ 0.41
NCLNQ969V3 RCN1P1-201ENST00000400413 996 ntBASIC17.63■□□□□ 0.41
NCLNQ969V3 AL137013.1-201ENST00000432946 1228 ntBASIC17.63■□□□□ 0.41
NCLNQ969V3 AP003041.3-201ENST00000527151 707 ntBASIC17.63■□□□□ 0.41
NCLNQ969V3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
NCLNQ969V3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.63■□□□□ 0.41
NCLNQ969V3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
NCLNQ969V3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.63■□□□□ 0.41
NCLNQ969V3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.63■□□□□ 0.41
NCLNQ969V3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.63■□□□□ 0.41
NCLNQ969V3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
NCLNQ969V3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.63■□□□□ 0.41
NCLNQ969V3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLNQ969V3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.63■□□□□ 0.41
NCLNQ969V3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.63■□□□□ 0.41
NCLNQ969V3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NCLNQ969V3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.62■□□□□ 0.41
NCLNQ969V3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NCLNQ969V3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
NCLNQ969V3 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.62■□□□□ 0.41
NCLNQ969V3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.62■□□□□ 0.41
NCLNQ969V3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLNQ969V3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLNQ969V3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NCLNQ969V3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NCLNQ969V3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLNQ969V3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.62■□□□□ 0.41
NCLNQ969V3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.62■□□□□ 0.41
NCLNQ969V3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLNQ969V3 HMGA1P5-201ENST00000412453 271 ntBASIC17.62■□□□□ 0.41
NCLNQ969V3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.62■□□□□ 0.41
NCLNQ969V3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.62■□□□□ 0.41
NCLNQ969V3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.62■□□□□ 0.41
NCLNQ969V3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NCLNQ969V3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.62■□□□□ 0.41
NCLNQ969V3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLNQ969V3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.62■□□□□ 0.41
NCLNQ969V3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLNQ969V3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.62■□□□□ 0.41
NCLNQ969V3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
NCLNQ969V3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLNQ969V3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLNQ969V3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLNQ969V3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.62■□□□□ 0.41
NCLNQ969V3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.62■□□□□ 0.41
NCLNQ969V3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLNQ969V3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.62■□□□□ 0.41
NCLNQ969V3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
NCLNQ969V3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
NCLNQ969V3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.61■□□□□ 0.41
NCLNQ969V3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLNQ969V3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLNQ969V3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLNQ969V3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLNQ969V3 TERF1P1-201ENST00000311003 1181 ntBASIC17.61■□□□□ 0.41
NCLNQ969V3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLNQ969V3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.61■□□□□ 0.41
NCLNQ969V3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCLNQ969V3 LIN28AP1-201ENST00000429574 405 ntBASIC17.61■□□□□ 0.41
NCLNQ969V3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NCLNQ969V3 KRT18P57-201ENST00000443599 1254 ntBASIC17.61■□□□□ 0.41
NCLNQ969V3 FAM210CP-201ENST00000445714 574 ntBASIC17.61■□□□□ 0.41
NCLNQ969V3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.61■□□□□ 0.41
NCLNQ969V3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.61■□□□□ 0.41
NCLNQ969V3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.61■□□□□ 0.41
NCLNQ969V3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
NCLNQ969V3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLNQ969V3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.61■□□□□ 0.41
NCLNQ969V3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCLNQ969V3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms