Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC22.3■■□□□ 1.16
RPGRQ92834 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC22.3■■□□□ 1.16
RPGRQ92834 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
RPGRQ92834 AC010327.4-202ENST00000591484 748 ntBASIC22.3■■□□□ 1.16
RPGRQ92834 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC22.3■■□□□ 1.16
RPGRQ92834 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPGRQ92834 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC22.3■■□□□ 1.16
RPGRQ92834 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.3■■□□□ 1.16
RPGRQ92834 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPGRQ92834 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPGRQ92834 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPGRQ92834 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPGRQ92834 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RPGRQ92834 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPGRQ92834 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.3■■□□□ 1.16
RPGRQ92834 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RPGRQ92834 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RPGRQ92834 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
RPGRQ92834 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RPGRQ92834 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RPGRQ92834 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.29■■□□□ 1.16
RPGRQ92834 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RPGRQ92834 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RPGRQ92834 MSRA-206ENST00000521209 814 ntTSL 3 BASIC22.29■■□□□ 1.16
RPGRQ92834 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC22.29■■□□□ 1.16
RPGRQ92834 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RPGRQ92834 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC22.29■■□□□ 1.16
RPGRQ92834 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC22.29■■□□□ 1.16
RPGRQ92834 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RPGRQ92834 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
RPGRQ92834 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RPGRQ92834 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RPGRQ92834 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC22.29■■□□□ 1.16
RPGRQ92834 AC055717.3-201ENST00000622967 595 ntBASIC22.29■■□□□ 1.16
RPGRQ92834 AC107918.4-202ENST00000641623 219 ntBASIC22.29■■□□□ 1.16
RPGRQ92834 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RPGRQ92834 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RPGRQ92834 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RPGRQ92834 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
RPGRQ92834 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RPGRQ92834 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.29■■□□□ 1.16
RPGRQ92834 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RPGRQ92834 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RPGRQ92834 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.29■■□□□ 1.16
RPGRQ92834 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RPGRQ92834 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RPGRQ92834 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RPGRQ92834 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RPGRQ92834 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RPGRQ92834 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
RPGRQ92834 CD9-202ENST00000382515 1229 ntTSL 5 BASIC22.28■■□□□ 1.16
RPGRQ92834 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RPGRQ92834 CENPM-204ENST00000402420 688 ntTSL 5 BASIC22.28■■□□□ 1.16
RPGRQ92834 UPF3AP3-201ENST00000420996 769 ntBASIC22.28■■□□□ 1.16
RPGRQ92834 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC22.28■■□□□ 1.16
RPGRQ92834 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC22.28■■□□□ 1.16
RPGRQ92834 RNF151-202ENST00000569210 853 ntTSL 2 BASIC22.28■■□□□ 1.16
RPGRQ92834 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC22.28■■□□□ 1.16
RPGRQ92834 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RPGRQ92834 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC22.28■■□□□ 1.16
RPGRQ92834 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RPGRQ92834 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RPGRQ92834 AP002414.3-201ENST00000589352 1468 ntBASIC22.28■■□□□ 1.16
RPGRQ92834 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC22.28■■□□□ 1.16
RPGRQ92834 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPGRQ92834 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPGRQ92834 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPGRQ92834 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPGRQ92834 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC22.27■■□□□ 1.16
RPGRQ92834 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RPGRQ92834 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPGRQ92834 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.27■■□□□ 1.16
RPGRQ92834 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RPGRQ92834 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RPGRQ92834 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPGRQ92834 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPGRQ92834 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.27■■□□□ 1.16
RPGRQ92834 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.27■■□□□ 1.16
RPGRQ92834 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
RPGRQ92834 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPGRQ92834 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC22.27■■□□□ 1.16
RPGRQ92834 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC22.27■■□□□ 1.16
RPGRQ92834 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.27■■□□□ 1.16
RPGRQ92834 AC005332.7-201ENST00000614046 2005 ntBASIC22.27■■□□□ 1.16
RPGRQ92834 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPGRQ92834 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC22.27■■□□□ 1.16
RPGRQ92834 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RPGRQ92834 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPGRQ92834 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPGRQ92834 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
RPGRQ92834 AC005082.1-201ENST00000413042 2259 ntBASIC22.27■■□□□ 1.16
RPGRQ92834 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPGRQ92834 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RPGRQ92834 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RPGRQ92834 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPGRQ92834 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RPGRQ92834 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC22.26■■□□□ 1.15
RPGRQ92834 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPGRQ92834 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RPGRQ92834 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms