Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 AC009065.1-201ENST00000564055 1225 ntBASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 LINC01311-201ENST00000565162 1445 ntBASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SMARCC2Q8TAQ2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SMARCC2Q8TAQ2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 AL157888.1-201ENST00000631930 593 ntBASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMARCC2Q8TAQ2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 MIR3917-201ENST00000580971 93 ntBASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 AL121956.5-201ENST00000625261 221 ntBASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMARCC2Q8TAQ2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 HYMAI.1-201ENST00000620949 238 ntBASIC21.24■□□□□ 0.99
SMARCC2Q8TAQ2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms