Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 KRT18P35-201ENST00000510488 1269 ntBASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 ABALON-201ENST00000629058 1903 ntBASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 AL096828.2-201ENST00000567259 1965 ntBASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC148Q8NFR7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC148Q8NFR7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
CCDC148Q8NFR7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC148Q8NFR7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC148Q8NFR7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC148Q8NFR7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CCDC148Q8NFR7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 IGHGP-201ENST00000390555 1178 ntBASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 AL445228.2-201ENST00000605589 952 ntBASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC148Q8NFR7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 AL354751.1-201ENST00000412768 1863 ntBASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC148Q8NFR7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms