Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIMC1Q8NDZ2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 AC012313.1-201ENST00000593393 3059 ntBASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 HCG11-201ENST00000411553 5696 ntBASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 MIR149-201ENST00000384879 89 ntBASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 AP000523.1-201ENST00000398242 1049 ntBASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 KRT18P38-201ENST00000449496 1282 ntBASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 AC141586.5-201ENST00000624546 2050 ntBASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 AC068880.1-201ENST00000507289 2297 ntBASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.12■□□□□ 0.33
SIMC1Q8NDZ2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 ARMC10P1-201ENST00000313754 855 ntBASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 AC079602.3-201ENST00000623931 403 ntBASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 TNRC18P3-201ENST00000441896 2691 ntBASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SIMC1Q8NDZ2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 PHGDH-209ENST00000641074 1780 ntBASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 AL024508.2-201ENST00000607749 1894 ntBASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 AK4P3-201ENST00000418260 669 ntBASIC17.1■□□□□ 0.33
SIMC1Q8NDZ2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms