Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 LINC00265-3P-201ENST00000447588 903 ntBASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 AC005336.2-201ENST00000593183 939 ntBASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 CLEC4GP1-201ENST00000596555 870 ntBASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF39Q8N4T4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
ARHGEF39Q8N4T4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF39Q8N4T4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
ARHGEF39Q8N4T4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF39Q8N4T4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF39Q8N4T4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF39Q8N4T4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF39Q8N4T4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF39Q8N4T4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF39Q8N4T4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
ARHGEF39Q8N4T4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ARHGEF39Q8N4T4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF39Q8N4T4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF39Q8N4T4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.08■□□□□ 0.33
ARHGEF39Q8N4T4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF39Q8N4T4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF39Q8N4T4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF39Q8N4T4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.08■□□□□ 0.32
ARHGEF39Q8N4T4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.08■□□□□ 0.32
ARHGEF39Q8N4T4 DUSP5P1-201ENST00000441325 1139 ntBASIC17.08■□□□□ 0.32
ARHGEF39Q8N4T4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.08■□□□□ 0.32
ARHGEF39Q8N4T4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.08■□□□□ 0.32
ARHGEF39Q8N4T4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.08■□□□□ 0.32
ARHGEF39Q8N4T4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF39Q8N4T4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF39Q8N4T4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF39Q8N4T4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF39Q8N4T4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ARHGEF39Q8N4T4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF39Q8N4T4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ARHGEF39Q8N4T4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF39Q8N4T4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 KRT17P6-201ENST00000453795 1220 ntBASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 AC112698.1-201ENST00000510299 916 ntBASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.07■□□□□ 0.32
ARHGEF39Q8N4T4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms