Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AL603756.1-201ENST00000606511 2163 ntBASIC15.97■□□□□ 0.15
LYSMD2Q8IV50 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.97■□□□□ 0.15
LYSMD2Q8IV50 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.97■□□□□ 0.15
LYSMD2Q8IV50 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD2Q8IV50 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD2Q8IV50 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LYSMD2Q8IV50 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 AC016769.1-201ENST00000409132 1010 ntBASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.96■□□□□ 0.15
LYSMD2Q8IV50 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LYSMD2Q8IV50 AL355312.1-201ENST00000407115 2176 ntBASIC15.96■□□□□ 0.14
LYSMD2Q8IV50 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.14
LYSMD2Q8IV50 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LYSMD2Q8IV50 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
LYSMD2Q8IV50 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
LYSMD2Q8IV50 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 AC006015.1-201ENST00000429970 570 ntBASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 RPS2P52-201ENST00000469610 820 ntBASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 AC005181.1-201ENST00000604782 1256 ntBASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD2Q8IV50 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 TSPY21P-201ENST00000433481 731 ntBASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD2Q8IV50 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms