Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 AP001094.4-201ENST00000579008 2176 ntBASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 MESTP1-201ENST00000404287 994 ntBASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 AL353807.1-201ENST00000427475 662 ntBASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 AP000692.2-201ENST00000608391 879 ntBASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 AC022211.2-201ENST00000585075 2527 ntBASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 AC036111.1-201ENST00000533973 1582 ntBASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 LINC01126-201ENST00000623515 1646 ntBASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 AL355802.2-201ENST00000402069 882 ntBASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRTM1Q86UE6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRTM1Q86UE6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
LRRTM1Q86UE6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
LRRTM1Q86UE6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRTM1Q86UE6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRRTM1Q86UE6 AC124067.4-201ENST00000519691 2379 ntBASIC15.77■□□□□ 0.11
LRRTM1Q86UE6 LINC00602-201ENST00000629776 2065 ntBASIC15.77■□□□□ 0.11
LRRTM1Q86UE6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LRRTM1Q86UE6 AC084018.2-201ENST00000613093 2607 ntBASIC15.77■□□□□ 0.11
LRRTM1Q86UE6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.77■□□□□ 0.11
LRRTM1Q86UE6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.77■□□□□ 0.11
LRRTM1Q86UE6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRRTM1Q86UE6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 AL355312.1-201ENST00000407115 2176 ntBASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms