Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 FLJ16779-201ENST00000612722 7638 ntBASIC12.03□□□□□ -0.48
SCXQ7RTU7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 IER3-202ENST00000376377 1350 ntBASIC12.03□□□□□ -0.48
SCXQ7RTU7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SCXQ7RTU7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SCXQ7RTU7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
SCXQ7RTU7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
SCXQ7RTU7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SCXQ7RTU7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SCXQ7RTU7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 TSPY23P-201ENST00000440136 739 ntBASIC12.02□□□□□ -0.49
SCXQ7RTU7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 KRT18P38-201ENST00000449496 1282 ntBASIC12.02□□□□□ -0.49
SCXQ7RTU7 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 NEK4P2-201ENST00000580004 1012 ntBASIC12.02□□□□□ -0.49
SCXQ7RTU7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 AC008894.3-201ENST00000624324 3103 ntBASIC12.02□□□□□ -0.49
SCXQ7RTU7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
SCXQ7RTU7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCXQ7RTU7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
SCXQ7RTU7 SDHAP1-207ENST00000440850 2000 ntBASIC12.01□□□□□ -0.49
SCXQ7RTU7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC12.01□□□□□ -0.49
SCXQ7RTU7 TBC1D3P2-202ENST00000577902 1649 ntBASIC12.01□□□□□ -0.49
SCXQ7RTU7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
SCXQ7RTU7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12.01□□□□□ -0.49
SCXQ7RTU7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SCXQ7RTU7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 AC099398.1-201ENST00000567919 2776 ntBASIC12.01□□□□□ -0.49
SCXQ7RTU7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.01□□□□□ -0.49
SCXQ7RTU7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.01□□□□□ -0.49
SCXQ7RTU7 TSPY21P-201ENST00000433481 731 ntBASIC12.01□□□□□ -0.49
SCXQ7RTU7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.01□□□□□ -0.49
SCXQ7RTU7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.01□□□□□ -0.49
SCXQ7RTU7 FAM86EP-206ENST00000510506 987 ntBASIC12.01□□□□□ -0.49
SCXQ7RTU7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.01□□□□□ -0.49
SCXQ7RTU7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.01□□□□□ -0.49
SCXQ7RTU7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.01□□□□□ -0.49
SCXQ7RTU7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.01□□□□□ -0.49
SCXQ7RTU7 MIR4674-201ENST00000582457 87 ntBASIC12.01□□□□□ -0.49
SCXQ7RTU7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.01□□□□□ -0.49
SCXQ7RTU7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.01□□□□□ -0.49
SCXQ7RTU7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SCXQ7RTU7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 AC139713.2-201ENST00000641328 2723 ntBASIC12.01□□□□□ -0.49
SCXQ7RTU7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCXQ7RTU7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms