Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 ZNF444P1-201ENST00000559497 298 ntBASIC17.04■□□□□ 0.32
RTL4Q6ZR62 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 AC010240.3-201ENST00000607688 395 ntBASIC17.04■□□□□ 0.32
RTL4Q6ZR62 HYMAI.1-201ENST00000620949 238 ntBASIC17.04■□□□□ 0.32
RTL4Q6ZR62 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 AC073592.3-201ENST00000625118 1834 ntBASIC17.04■□□□□ 0.32
RTL4Q6ZR62 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RTL4Q6ZR62 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 AL357033.4-201ENST00000617703 1807 ntBASIC17.03■□□□□ 0.32
RTL4Q6ZR62 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 FAM86EP-206ENST00000510506 987 ntBASIC17.03■□□□□ 0.32
RTL4Q6ZR62 VENTXP5-201ENST00000523979 775 ntBASIC17.03■□□□□ 0.32
RTL4Q6ZR62 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 AC083849.1-201ENST00000615227 514 ntBASIC17.03■□□□□ 0.32
RTL4Q6ZR62 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 AL157888.1-201ENST00000631930 593 ntBASIC17.03■□□□□ 0.32
RTL4Q6ZR62 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RTL4Q6ZR62 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 MTMR9LP-203ENST00000426597 1545 ntBASIC17.02■□□□□ 0.32
RTL4Q6ZR62 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.02■□□□□ 0.32
RTL4Q6ZR62 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.02■□□□□ 0.32
RTL4Q6ZR62 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 AL136038.3-201ENST00000561909 1096 ntBASIC17.02■□□□□ 0.32
RTL4Q6ZR62 AC009065.1-201ENST00000564055 1225 ntBASIC17.02■□□□□ 0.32
RTL4Q6ZR62 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 MIR3180-4-201ENST00000582223 153 ntBASIC17.02■□□□□ 0.32
RTL4Q6ZR62 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 AP000550.4-202ENST00000639755 178 ntBASIC17.02■□□□□ 0.32
RTL4Q6ZR62 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 NOC2LP1-202ENST00000452600 2235 ntBASIC17.02■□□□□ 0.32
RTL4Q6ZR62 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTL4Q6ZR62 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
RTL4Q6ZR62 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
RTL4Q6ZR62 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RTL4Q6ZR62 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms