Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
PACS1Q6VY07 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PACS1Q6VY07 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.35■□□□□ 0.53
PACS1Q6VY07 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.35■□□□□ 0.53
PACS1Q6VY07 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.35■□□□□ 0.53
PACS1Q6VY07 AC009102.3-201ENST00000623118 1491 ntBASIC18.35■□□□□ 0.53
PACS1Q6VY07 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
PACS1Q6VY07 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PACS1Q6VY07 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PACS1Q6VY07 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
PACS1Q6VY07 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 AC113347.1-201ENST00000413321 391 ntBASIC18.35■□□□□ 0.53
PACS1Q6VY07 AC211429.1-201ENST00000415277 523 ntBASIC18.35■□□□□ 0.53
PACS1Q6VY07 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.35■□□□□ 0.53
PACS1Q6VY07 KRT18P23-201ENST00000435622 1283 ntBASIC18.35■□□□□ 0.53
PACS1Q6VY07 AC009947.2-201ENST00000444014 672 ntBASIC18.35■□□□□ 0.53
PACS1Q6VY07 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.35■□□□□ 0.53
PACS1Q6VY07 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.35■□□□□ 0.53
PACS1Q6VY07 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 LINC01023-201ENST00000606054 436 ntBASIC18.35■□□□□ 0.53
PACS1Q6VY07 AL138966.2-201ENST00000621997 464 ntBASIC18.35■□□□□ 0.53
PACS1Q6VY07 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PACS1Q6VY07 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACS1Q6VY07 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.34■□□□□ 0.53
PACS1Q6VY07 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PACS1Q6VY07 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.34■□□□□ 0.53
PACS1Q6VY07 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.34■□□□□ 0.53
PACS1Q6VY07 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PACS1Q6VY07 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PACS1Q6VY07 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PACS1Q6VY07 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PACS1Q6VY07 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 MIR149-201ENST00000384879 89 ntBASIC18.34■□□□□ 0.53
PACS1Q6VY07 AP000523.1-201ENST00000398242 1049 ntBASIC18.34■□□□□ 0.53
PACS1Q6VY07 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PACS1Q6VY07 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 AC112497.1-201ENST00000624824 639 ntBASIC18.34■□□□□ 0.53
PACS1Q6VY07 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.34■□□□□ 0.53
PACS1Q6VY07 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
PACS1Q6VY07 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.34■□□□□ 0.53
PACS1Q6VY07 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
PACS1Q6VY07 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACS1Q6VY07 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.34■□□□□ 0.53
PACS1Q6VY07 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PACS1Q6VY07 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PACS1Q6VY07 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PACS1Q6VY07 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PACS1Q6VY07 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PACS1Q6VY07 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PACS1Q6VY07 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PACS1Q6VY07 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PACS1Q6VY07 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PACS1Q6VY07 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
PACS1Q6VY07 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.33■□□□□ 0.52
PACS1Q6VY07 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms