Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 AL022342.1-201ENST00000400363 863 ntBASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 AC125634.1-201ENST00000438758 1403 ntBASIC20.36■□□□□ 0.85
CCDC62Q6P9F0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 KRT18P65-201ENST00000439811 1286 ntBASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 AC079776.4-201ENST00000511039 504 ntBASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCDC62Q6P9F0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 INTS4P1-201ENST00000438455 1935 ntBASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 FAM197Y8-203ENST00000450145 560 ntBASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 AC009533.2-201ENST00000543664 586 ntBASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC62Q6P9F0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC62Q6P9F0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC62Q6P9F0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.33■□□□□ 0.85
CCDC62Q6P9F0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC62Q6P9F0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC62Q6P9F0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC62Q6P9F0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC62Q6P9F0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC62Q6P9F0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC62Q6P9F0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms