Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 AC073912.3-201ENST00000624414 853 ntBASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 AL023973.1-201ENST00000624619 620 ntBASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 AC092865.7-201ENST00000641832 219 ntBASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 SLC25A6P5-201ENST00000435663 894 ntBASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF549Q6P9A3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ZNF549Q6P9A3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF549Q6P9A3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF549Q6P9A3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF549Q6P9A3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ZNF549Q6P9A3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF549Q6P9A3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.02■□□□□ 0.48
ZNF549Q6P9A3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF549Q6P9A3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF549Q6P9A3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF549Q6P9A3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.02■□□□□ 0.48
ZNF549Q6P9A3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF549Q6P9A3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF549Q6P9A3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.02■□□□□ 0.48
ZNF549Q6P9A3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF549Q6P9A3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ZNF549Q6P9A3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF549Q6P9A3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF549Q6P9A3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF549Q6P9A3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF549Q6P9A3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.02■□□□□ 0.47
ZNF549Q6P9A3 AC132938.6-201ENST00000623828 1655 ntBASIC18.02■□□□□ 0.47
ZNF549Q6P9A3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF549Q6P9A3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.02■□□□□ 0.47
ZNF549Q6P9A3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF549Q6P9A3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
ZNF549Q6P9A3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
ZNF549Q6P9A3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
ZNF549Q6P9A3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.02■□□□□ 0.47
ZNF549Q6P9A3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
ZNF549Q6P9A3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF549Q6P9A3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF549Q6P9A3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.01■□□□□ 0.47
ZNF549Q6P9A3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.01■□□□□ 0.47
ZNF549Q6P9A3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF549Q6P9A3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF549Q6P9A3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF549Q6P9A3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ZNF549Q6P9A3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
ZNF549Q6P9A3 AC134043.2-201ENST00000624206 2238 ntBASIC18.01■□□□□ 0.47
ZNF549Q6P9A3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF549Q6P9A3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms