Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 IER3-202ENST00000376377 1350 ntBASIC18.93■□□□□ 0.62
TTC39BQ5VTQ0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 MIR662-201ENST00000384847 95 ntBASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 AC116407.4-201ENST00000623319 1061 ntBASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
TTC39BQ5VTQ0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TTC39BQ5VTQ0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 BCL2-203ENST00000589955 5011 ntBASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 KRT89P-201ENST00000620027 1478 ntBASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TTC39BQ5VTQ0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.62
TTC39BQ5VTQ0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TTC39BQ5VTQ0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.89■□□□□ 0.62
TTC39BQ5VTQ0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms