Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 MTCL1P1-201ENST00000446207 792 ntBASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 GAPDHP21-201ENST00000450301 1010 ntBASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 AC087641.1-201ENST00000557561 1021 ntBASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO4Q2I0M5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RSPO4Q2I0M5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RSPO4Q2I0M5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RSPO4Q2I0M5 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RSPO4Q2I0M5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 MIR4751-201ENST00000578027 74 ntBASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 AC004835.2-201ENST00000603762 682 ntBASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 AL022326.1-202ENST00000641533 845 ntBASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.51■□□□□ 0.39
RSPO4Q2I0M5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 AL357033.4-201ENST00000617703 1807 ntBASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 AC022494.1-201ENST00000466044 728 ntBASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RSPO4Q2I0M5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RSPO4Q2I0M5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms